unravel.cluster_stats.clusters module#
Use cstats_clusters (clusters) from UNRAVEL to make a cluster index image from a .nii.gz image.
.. note:: - This uses the cluster command from FSL and then reverses the clusters so that the largest cluster is 1, the second largest is 2, etc.
Usage#
cstats_clusters -i path/image.nii.gz [-ms 100] [-t 0.5] [-o path/image_rev_cluster_index.nii.gz] [-v]