unravel.image_tools.extend module#

Use img_extend from UNRAVEL to load a 3D image, extend one side, and save it as tifs

Usage:

img_extend -i ochann -o ochann_extended -s front -e 100 [-d list of paths] [-p sample??] [-v]

unravel.image_tools.extend.parse_args()[source]#
unravel.image_tools.extend.extend_one_side_3d_array(ndarray, side, extension)[source]#

Extend a 3D ndarray on one side (‘front’, ‘back’, ‘left’, ‘right’, ‘top’, ‘bottom’) by X voxels

unravel.image_tools.extend.main()[source]#