unravel.core package

• unravel.core.help_formatter module
  • SuppressMetavar
  • CustomHelpAction
  • RichArgumentParser
  • SM
  • format_argparse_help()
  • format_docstring_for_terminal()
• unravel.core.config module
  • AttrDict
  • Config
  • Configuration
• unravel.core.img_io module
  • Main Functions:
  • Helper Functions:
  • return_3D_img()
  • metadata()
  • extract_resolution()
  • load_czi()
  • load_tifs()
  • load_3D_tif()
  • nii_path_or_nii()
  • nii_to_ndarray()
  • load_nii()
  • load_nii_subset()
  • load_h5()
  • load_zarr()
  • resolve_path()
  • save_metadata_to_file()
  • load_image_metadata_from_txt()
  • load_3D_img()
  • save_as_nii()
  • save_as_tifs()
  • save_as_zarr()
  • save_as_h5()
  • save_3D_img()
  • zarr_level_to_tifs()
  • nii_voxel_size()
• unravel.core.img_tools module
  • resample()
  • reorient_axes()
  • reverse_reorient_axes()
  • pixel_classification()
  • pad()
  • reorient_ndarray()
  • reorient_ndarray2()
  • process_slice()
  • rolling_ball_subtraction_opencv_parallel()
  • label_IDs()
  • find_bounding_box()
  • crop()
• unravel.core.utils module
  • load_config()
  • get_samples()
  • CustomMofNCompleteColumn
  • CustomTimeElapsedColumn
  • CustomTimeRemainingColumn
  • AverageTimePerIterationColumn
  • initialize_progress_bar()
  • verbose_start_msg()
  • verbose_end_msg()
  • log_command()
  • print_func_name_args_times()
  • load_text_from_file()
  • copy_files()
  • match_files()
  • get_stem()
  • get_extension()
  • get_pad_percent()