unravel.segment package

• unravel.segment.brain_mask module
  • Usage:
  • parse_args()
  • main()
• unravel.segment.copy_tifs module
  • Usage to prep for seg_brain_mask:
  • Usage to copy tifs for ilastik:
  • parse_args()
  • copy_specific_tifs()
  • main()
• unravel.segment.ilastik_pixel_classification module
  • Usage:
  • parse_args()
  • count_files()
  • save_labels_as_masks()
  • main()
• unravel.segment.labels_to_masks module
  • Usage:
  • parse_args()
  • save_labels_as_masks()
  • main()