unravel.register.reg_check module#

Use reg_check from UNRAVEL to check registration QC, copies autofl_`*`um_masked_fixed_reg_input.nii.gz and atlas_in_tissue_space.nii.gz for each sample to a target dir.

Usage for copying to the current working directory:#

reg_check [-ro reg_outputs] [-fri fixed_reg_in] [-wa warped_atlas] [-d list of paths] [-p sample??] [-v]

Usage for copying to a target directory:

reg_check -td <path/target_output_dir> [-ro reg_outputs] [-fri fixed_reg_in] [-wa warped_atlas] [-d list of paths] [-p sample??] [-v]

unravel.register.reg_check.parse_args()[source]#
unravel.register.reg_check.main()[source]#